cargo / kira-ls-aligner
kira-ls-aligner 0.5.0
- processes
- 360
- operations
- 74K
- packages
- 189
- compiler runs
- 516
- connections
- 1
- job time
- 4m 56s
- capture
- 869 KB
- records
- 134K
- bytes / record
- 6.5
Unified short- and long-read sequence aligner written in Rust 2024. It combines minimap2-style minimizers and chaining with BWA-MEM2-style exact-match anchoring and output semantics. The goal is drop-in compatibility with bwa-mem pipelines while supporting long reads efficiently.
Build behaviourhas a build scriptcompiled C/C++
Release 0.5.0 run 8b12ebda-5389-400b-b8d9-53d736f2d8ed · built 2026-10-10
Artifact
- kira_ls_alignerbinary · retained · product 3
- libkira_ls_aligner.rlibfile · retained · product
| Checks | Detections |
|---|---|
| Build behavior | |
| ✓ Network activity | — |
| ✓ Sensitive data access and transfer | — |
| ✓ Cross-process access | — |
| ✓ Build file changes | — |
| ✓ Build script activity | — |
| ✓ Data flow analysis | — |
| ✓ Filesystem writes | — |
| ✓ Context collection | — |
| Supply chain | |
| ▲ Known vulnerabilities | — |
| ✓ Build-time dependency advisories | — |
| ▲ Dependency advisories | — |
| ✓ Declared and observed dependencies | — |
| ✓ Dependency and toolchain versions | — |
| Pipeline | |
| ✓ Pipeline coverage | — |
Detections
0No detections
No abnormal activity detected across 74K flows.
Network
0 peerscargo fetched 13,380 files from static.crates.io
| Vulnerable dependencies3 | Package | Version | Fix | Severity | Title | Reach |
|---|---|---|---|---|---|---|
| RUSTSEC-2026-0204 | crossbeam-epoch | 0.9.18 | >=0.9.20 | high | Invalid pointer dereference in `fmt::Pointer` impl for `Atomic` and `Shared` when the underlying pointer is invalid | retained |
| RUSTSEC-2026-0190 | anyhow | 1.0.100 | >=1.0.103 | low | Unsoundness in `Error::downcast_mut()` | retained |
| RUSTSEC-2026-0186 | memmap2 | 0.9.9 | >=0.9.11 | low | Unchecked pointer offset in crate `memmap2` | retained |
Dependencies
193 packages, 23 with a build script that ran, 11 doing more than compiling| Package | Version | Usage | Build behaviour | |
|---|---|---|---|---|
| winapi-i686-pc-windows-gnu | 0.4.0 | platform_gated | build script, not runprebuilt objects | |
| winapi-x86_64-pc-windows-gnu | 0.4.0 | platform_gated | build script, not runprebuilt objects | |
| windows_aarch64_gnullvm | 0.52.6 | platform_gated | build script, not runprebuilt objects | |
| windows_aarch64_msvc | 0.52.6 | platform_gated | build script, not runprebuilt objects | |
| windows_i686_gnu | 0.52.6 | platform_gated | build script, not runprebuilt objects | |
| windows_i686_gnullvm | 0.52.6 | platform_gated | build script, not runprebuilt objects | |
| windows_i686_msvc | 0.52.6 | platform_gated | build script, not runprebuilt objects | |
| windows_x86_64_gnu | 0.52.6 | platform_gated | build script, not runprebuilt objects | |
| windows_x86_64_gnullvm | 0.52.6 | platform_gated | build script, not runprebuilt objects | |
| windows_x86_64_msvc | 0.52.6 | platform_gated | build script, not runprebuilt objects | |
| wit-bindgen | 0.51.0 | platform_gated | build script, not runprebuilt objects | |
| anyhow direct | 1.0.100 | linked | build script | |
| bzip2-sys | 0.1.13+1.0.8 | linked | build script | |
| clap_derive | 4.5.49 | linked | proc macro | |
| crc32fast | 1.5.0 | linked | build script | |
| crossbeam-utils | 0.8.21 | linked | build script | |
| crunchy | 0.2.4 | unrelated | build script, not run | |
| getrandom | 0.3.4 | linked | build script | |
| ld-linux-x86-64.so.2 | linked | system library | ||
| libc direct | 0.2.180 | linked | build script | |
| libc.so.6 | linked | system library | ||
| libdeflate-sys | 1.25.2 | linked | build script | |
| libgcc_s.so.1 | linked | system library | ||
| liblzma-sys | 0.3.13 | linked | build script | |
| liblzma.so.5 | linked | system library | ||
| libm.so.6 | linked | system library | ||
| libmimalloc-sys | 0.1.49 | linked | build script | |
| libmvec.so.1 | linked | system library | ||
| ntapi | 0.4.2 | platform_gated | build script, not run | |
| num-traits | 0.2.19 | unrelated | build script | |
| portable-atomic | 1.13.0 | linked | build script | |
| proc-macro2 | 1.0.106 | linked | build script | |
| quote | 1.0.44 | linked | build script | |
| rayon-core | 1.13.0 | linked | build script | |
| rustix | 1.1.3 | linked | build script | |
| rustversion | 1.0.22 | buildtime_only | build script, not runproc macro | |
| serde_derive | 1.0.228 | buildtime_only | proc macro | |
| serde_json | 1.0.150 | unrelated | build script | |
| thiserror direct | 2.0.18 | linked | build script | |
| thiserror-impl | 2.0.18 | linked | proc macro | |
| wasm-bindgen | 0.2.108 | platform_gated | build script, not run | |
| wasm-bindgen-macro | 0.2.108 | buildtime_only | proc macro | |
| wasm-bindgen-shared | 0.2.108 | platform_gated | build script, not run | |
| winapi | 0.3.9 | platform_gated | build script, not run | |
| windows-implement | 0.60.2 | buildtime_only | proc macro | |
| windows-interface | 0.59.3 | buildtime_only | proc macro | |
| zerocopy | 0.8.48 | unrelated | build script | |
| zerocopy-derive | 0.8.48 | unrelated | proc macro | |
| zmij | 1.0.21 | unrelated | build script | |
| zstd-safe | 7.2.4 | linked | build script | |
| zstd-sys | 2.0.16+zstd.1.5.7 | linked | build script | |
| aho-corasick direct | 1.1.4 | linked | ||
| allocator-api2 | 0.2.21 | linked | ||
| anes | 0.1.6 | unrelated | ||
| anstream | 0.6.21 | linked | ||
| anstyle | 1.0.13 | linked | ||
| anstyle-parse | 0.2.7 | linked | ||
| anstyle-query | 1.1.5 | linked | ||
| anstyle-wincon | 3.0.11 | platform_gated | ||
| autocfg | 1.5.1 | unrelated | ||
| bit-vec | 0.9.1 | linked | ||
| bitflags | 2.11.0 | linked | ||
| block-buffer | 0.12.0 | linked | ||
| bstr | 1.12.1 | linked | ||
| buffer-redux | 1.1.0 | linked | ||
| bumpalo | 3.19.1 | buildtime_only | ||
| bytecount | 0.6.9 | linked | ||
| bytes | 1.11.1 | linked | ||
| bzip2 | 0.4.4 | linked | ||
| bzip2 | 0.6.1 | linked | ||
| cast | 0.3.0 | unrelated | ||
| cc | 1.2.54 | linked | ||
| cfg-if | 1.0.4 | linked | ||
| ciborium | 0.2.2 | unrelated | ||
| ciborium-io | 0.2.2 | unrelated | ||
| ciborium-ll | 0.2.2 | unrelated | ||
| clap direct | 4.5.54 | linked | ||
| clap_builder | 4.5.54 | linked | ||
| clap_lex | 0.7.7 | linked | ||
| colorchoice | 1.0.4 | linked | ||
| console | 0.16.2 | linked | ||
| const-oid | 0.10.2 | linked | ||
| core_affinity direct | 0.8.3 | linked | ||
| cpufeatures | 0.3.0 | linked | ||
| criterion | 0.5.1 | unrelated | ||
| criterion-plot | 0.5.0 | unrelated | ||
| crossbeam-channel | 0.5.15 | linked | ||
| crossbeam-deque | 0.8.6 | linked | ||
| crossbeam-epoch | 0.9.18 | linked | ||
| crypto-common | 0.2.2 | linked | ||
| digest | 0.11.3 | linked | ||
| either | 1.15.0 | linked | ||
| encode_unicode | 1.0.0 | platform_gated | ||
| equivalent | 1.0.2 | linked | ||
| errno | 0.3.14 | platform_gated | ||
| fastrand | 2.4.1 | linked | ||
| find-msvc-tools | 0.1.8 | linked | ||
| flate2 direct | 1.1.8 | linked | ||
| foldhash | 0.2.0 | linked | ||
| half | 2.7.1 | unrelated | ||
| hashbrown | 0.16.1 | linked | ||
| hashbrown | 0.17.1 | linked | ||
| heck | 0.5.0 | linked | ||
| hermit-abi | 0.5.2 | platform_gated | ||
| hybrid-array | 0.4.12 | linked | ||
| indexmap | 2.14.0 | linked | ||
| indicatif direct | 0.18.4 | linked | ||
| is-terminal | 0.4.17 | unrelated | ||
| is_terminal_polyfill | 1.70.2 | linked | ||
| itertools | 0.10.5 | unrelated | ||
| itoa | 1.0.18 | unrelated | ||
| jobserver | 0.1.34 | linked | ||
| js-sys | 0.3.85 | platform_gated | ||
| kira-bam direct | 0.4.0 | linked | ||
| kira-fastq direct | 0.4.0 | linked | ||
| kira-simd direct | 0.1.0 | linked | ||
| kira_kv_engine direct | 0.7.0 | linked | ||
| lexical-core | 1.0.6 | linked | ||
| lexical-parse-float | 1.0.6 | linked | ||
| lexical-parse-integer | 1.0.6 | linked | ||
| lexical-util | 1.0.7 | linked | ||
| lexical-write-float | 1.0.6 | linked | ||
| lexical-write-integer | 1.0.6 | linked | ||
| libbz2-rs-sys | 0.2.5 | linked | ||
| libdeflater | 1.25.2 | linked | ||
| liblzma | 0.3.6 | linked | ||
| linux-raw-sys | 0.11.0 | linked | ||
| lzma-rust2 | 0.16.3 | linked | ||
| md-5 | 0.11.0 | linked | ||
| memchr | 2.7.6 | linked | ||
| memmap2 direct | 0.9.9 | linked | ||
| mimalloc direct | 0.1.52 | linked | ||
| needletail direct | 0.6.3 | linked | ||
| noodles-bam | 0.89.0 | linked | ||
| noodles-bgzf | 0.47.0 | linked | ||
| noodles-core | 0.20.0 | linked | ||
| noodles-cram | 0.93.0 | linked | ||
| noodles-csi | 0.56.0 | linked | ||
| noodles-fasta | 0.61.0 | linked | ||
| noodles-sam direct | 0.85.0 | linked | ||
| num_cpus | 1.17.0 | linked | ||
| objc2-core-foundation | 0.3.1 | platform_gated | ||
| objc2-io-kit | 0.3.1 | platform_gated | ||
| once_cell | 1.21.3 | linked | ||
| once_cell_polyfill | 1.70.2 | platform_gated | ||
| oorandom | 11.1.5 | unrelated | ||
| pkg-config | 0.3.32 | linked | ||
| r-efi | 5.3.0 | platform_gated | ||
| rand_core | 0.9.5 | linked | ||
| rayon direct | 1.11.0 | linked | ||
| regex | 1.12.3 | unrelated | ||
| regex-automata | 0.4.14 | linked | ||
| regex-syntax | 0.8.10 | linked | ||
| rustc-hash direct | 2.1.1 | linked | ||
| same-file | 1.0.6 | unrelated | ||
| sha2 | 0.11.0 | linked | ||
| shlex | 1.3.0 | linked | ||
| strsim | 0.11.1 | linked | ||
| syn | 2.0.114 | linked | ||
| sysinfo direct | 0.38.2 | linked | ||
| tempfile direct | 3.25.0 | linked | ||
| tinytemplate | 1.2.1 | unrelated | ||
| typenum | 1.20.0 | linked | ||
| unicode-ident | 1.0.22 | linked | ||
| unicode-width | 0.2.2 | linked | ||
| unit-prefix | 0.5.2 | linked | ||
| utf8parse | 0.2.2 | linked | ||
| walkdir | 2.5.0 | unrelated | ||
| wasip2 | 1.0.2+wasi-0.2.9 | platform_gated | ||
| wasm-bindgen-macro-support | 0.2.108 | buildtime_only | ||
| web-time | 1.1.0 | platform_gated | ||
| winapi-util | 0.1.11 | unrelated | ||
| windows | 0.62.2 | platform_gated | ||
| windows-collections | 0.3.2 | platform_gated | ||
| windows-core | 0.62.2 | platform_gated | ||
| windows-future | 0.3.2 | platform_gated | ||
| windows-link | 0.2.1 | platform_gated | ||
| windows-numerics | 0.3.1 | platform_gated | ||
| windows-result | 0.4.1 | platform_gated | ||
| windows-strings | 0.5.1 | platform_gated | ||
| windows-targets | 0.52.6 | platform_gated | ||
| windows-threading | 0.2.1 | platform_gated | ||
| wyhash | 0.6.0 | linked | ||
| zlib-rs | 0.5.5 | linked | ||
| zstd | 0.13.3 | linked | ||
| serde | 1.0.228 | dead | build script | |
| serde_core | 1.0.228 | dead | build script | |
| adler2 | 2.0.1 | dead | ||
| miniz_oxide | 0.8.9 | dead | ||
| simd-adler32 | 0.3.8 | dead | ||
| windows-sys direct | 0.59.0 | unverified | ||
| windows-sys | 0.61.2 | unverified | ||
| zlib-rs | 0.6.3 | dead |
1 of 1 jobs captured: build-test success · Generated 2026-10-10 · tarp 0.1.0+20261009214341-g814b5de79005 · run 8b12ebda-5389-400b-b8d9-53d736f2d8ed